Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • Bio Informatics Workflows and the Grid

    Dear All,

    I am looking for a workflow that is compute and data intensive and also real world. So i searched the Internet and came across applictions of bio informatics and gene sequencing, Which i found that it might be something what i am looking for.
    also i wanted some workflow which can have some variation from its generic to more specific form.

    I figured out after having read the NGS, that i can use different free or proprietary applications for each of the steps in the workflow, ie- for reading , alignment and analysis.

    Also because each of the activity is huge and data intensive so i can do the activity in parallel by splitting the data that is to be processed.

    Can you guys please help me with my objective??
    if i want to do this experiment at the Austrian Grid what software i will need and where do i get these software and the datasets to be used as input data.

    kind regards

  • #2
    Your best bet would probably collaborating with local researchers in the NGS space; also not quite sure what your objectives are -- test drive a grid environment?

    Comment

    Latest Articles

    Collapse

    • seqadmin
      Strategies for Sequencing Challenging Samples
      by seqadmin


      Despite advancements in sequencing platforms and related sample preparation technologies, certain sample types continue to present significant challenges that can compromise sequencing results. Pedro Echave, Senior Manager of the Global Business Segment at Revvity, explained that the success of a sequencing experiment ultimately depends on the amount and integrity of the nucleic acid template (RNA or DNA) obtained from a sample. “The better the quality of the nucleic acid isolated...
      03-22-2024, 06:39 AM
    • seqadmin
      Techniques and Challenges in Conservation Genomics
      by seqadmin



      The field of conservation genomics centers on applying genomics technologies in support of conservation efforts and the preservation of biodiversity. This article features interviews with two researchers who showcase their innovative work and highlight the current state and future of conservation genomics.

      Avian Conservation
      Matthew DeSaix, a recent doctoral graduate from Kristen Ruegg’s lab at The University of Colorado, shared that most of his research...
      03-08-2024, 10:41 AM

    ad_right_rmr

    Collapse

    News

    Collapse

    Topics Statistics Last Post
    Started by seqadmin, 03-27-2024, 06:37 PM
    0 responses
    12 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 03-27-2024, 06:07 PM
    0 responses
    11 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 03-22-2024, 10:03 AM
    0 responses
    52 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 03-21-2024, 07:32 AM
    0 responses
    68 views
    0 likes
    Last Post seqadmin  
    Working...
    X