Go Back   SEQanswers > Bioinformatics > Bioinformatics

Similar Threads
Thread Thread Starter Forum Replies Last Post
Samtools SNP Caller versus MAQ SNP caller BertieWooster Bioinformatics 5 05-18-2012 01:41 PM
best-practices for assigning read-groups for snp-caller brentp Bioinformatics 2 12-20-2011 07:34 AM
GATK unified SNP caller error dakl Bioinformatics 4 11-23-2010 09:27 PM
Aligner/SNP caller for Illumina data sklages Bioinformatics 2 10-06-2010 04:48 AM
SNP caller for RNA-Seq data shurjo Bioinformatics 0 12-08-2009 02:58 PM

Thread Tools
Old 01-22-2010, 05:53 AM   #1
Location: Boston

Join Date: Nov 2008
Posts: 26
Question SNP Caller for BAM Files

Have people used other tools apart from Samtools' SNP caller for calling SNPs? If yes, how does it compare?

AnamikaDarwin is offline   Reply With Quote

snp caller bam files

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 07:01 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO