Hello, I am wondering why I get two very different results in the metrics of the Newbler GSmapper
numMappedReads = 362295, 96.47%, 48.20%;
numMappedBases = 51845395, 92.31%, 91.33%;
which is the right percentage? the second one does not make any sense to me, does not coincide with the trimmed reads result or anything.
thank you very much
numMappedReads = 362295, 96.47%, 48.20%;
numMappedBases = 51845395, 92.31%, 91.33%;
which is the right percentage? the second one does not make any sense to me, does not coincide with the trimmed reads result or anything.
thank you very much
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