I am testing the CollectRnaSeqMetrics script in Picard Tools for the first time and received the following error message:
INFO Date Time CollectRnaSeqMetrics Loaded 0 genes.
Then the output begins to show “Processed 1,000,000 records” and so on. The file created at the end of the process includes numbers for PF_Bases, PF_Aligned_Bases, and Intergenic_bases but all other fields (Ribosomal_bases, coding_bases, pct_UTR_bases, etc) contain 0’s.
What am I doing wrong? All help is appreciated, thanks.
INFO Date Time CollectRnaSeqMetrics Loaded 0 genes.
Then the output begins to show “Processed 1,000,000 records” and so on. The file created at the end of the process includes numbers for PF_Bases, PF_Aligned_Bases, and Intergenic_bases but all other fields (Ribosomal_bases, coding_bases, pct_UTR_bases, etc) contain 0’s.
What am I doing wrong? All help is appreciated, thanks.
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