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Old 03-22-2016, 09:07 AM   #1
paumarc
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Location: Zagreb

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Default Does exists some repository with bam/fastq files?

Hi everybody

I am trying to set up a pipeline for detecting large gene deletions. I think the samples that I am testing don't contain this kind of deletions. I would like to test the pipeline with a well-known sample. There is some repository where to download files that i could use?

thanks
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Old 03-22-2016, 10:39 AM   #2
mastal
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The ENA and the SRA.

http://www.ebi.ac.uk/ena

http://www.ncbi.nlm.nih.gov/sra

You coud try some well-studied samples from the 1000 genomes project.

http://www.1000genomes.org/
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