Hi all,
I'm currently trying to figure out how to sort the exome data from several samples so that I would have a list with SNPs/indels including the SNPs/Indels shared by all of the patients and none of the controls.
i.e. I would like to filter out all of the SNPs/indels from the controls and find a common mutation in the cases.
Does anyone know some nice program that could do this? I tried to use exome-assistant, but it seems to accept only data in hg18 format... My data is hg19.
Sincerely,
Sini
I'm currently trying to figure out how to sort the exome data from several samples so that I would have a list with SNPs/indels including the SNPs/Indels shared by all of the patients and none of the controls.
i.e. I would like to filter out all of the SNPs/indels from the controls and find a common mutation in the cases.
Does anyone know some nice program that could do this? I tried to use exome-assistant, but it seems to accept only data in hg18 format... My data is hg19.
Sincerely,
Sini
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