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Old 08-01-2012, 12:05 AM   #1
stevebaeyen
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Default SSR screening:better tools than RepeatFinder?

Hi ,
has anybody experience using SSR tools for repeat discovery in draft genomes? I will test Repeatfinder and Sputnik but I was wondering if there are other tools out there.
Thanks for helping out!
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Old 11-25-2013, 09:07 PM   #2
shivam
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yes, There is also very good tool , MISA (Perl based) . I think it is really useful for you.
if you successfully run the sputnik then please send me the procedure , How to run it.
Thank You
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Old 11-25-2013, 09:19 PM   #3
shivam
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Default Sputnik (ssr finding tool)

If anyone run sputnik (ssr finding tool) please send me the procedure , how to run that exe file.
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