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Old 05-29-2020, 03:09 PM   #1
tickteng
Junior Member
 
Location: Japan

Join Date: Apr 2019
Posts: 6
Default SURPI database

Hi,

I am trying to perform this metagenomic pipeline (https://github.com/chiulab/SURPI-plus-dist).
I was able to create the container and run the command to download library.
However, near the error I got the following error:

Allocating memory for hash tables...Killed
Makefile:94: recipe for target 'COMP_SNAP_no_primate/snap_index_nt_curated_primate_subtracted.FASTA.1/Genome' failed
make: *** [COMP_SNAP_no_primate/snap_index_nt_curated_primate_subtracted.FASTA.1/Genome] Error 137
make: Leaving directory '/home/junya/patrick/ref'
INFO: Cleaning up image..

Previoulsy to that I got a warning message

perl: warning: Falling back to a fallback locale ("en_US.UTF-8").

Is that related? anyone can help me fix this issue?
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