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Old 08-14-2014, 01:26 PM   #1
KellerMac
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Default RNAseq .wig files

Hello all! I need to analyze some RNAseq data in .wig (wiggle) format, that I obtained from a paper, but I am unfamiliar with this format. I want to filter for a certian set of genes (ovary related) and then sort based on differential expression. Have you had experience with .wig files? Can anyone point me in a helpfull direction?
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Old 08-14-2014, 01:43 PM   #2
GenoMax
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Information about the .wig format: https://genome.ucsc.edu/goldenPath/help/wiggle.html
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Old 08-14-2014, 02:24 PM   #3
KellerMac
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I found a post on BioStar that suggested using BEDOPS to convert to the more common BED file and proceed in analysis from there.
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