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Old 04-29-2010, 02:06 AM   #1
Junior Member
Location: UK

Join Date: Jul 2009
Posts: 3
Question Help please, regulatory elements

Hi All,

I may not in the wrong place, but please help me and you will be really appreciated!

I would like to identify the potential regulatory element (predicted or experimental) from a genome region. I tried to google around, but can not find a database contains all the information. I also tried to search UCSC genome browser, but found out there are so many tracks about expression and regulation that I can not tell which one suit my aim better than the others.
Can you please suggest what kinds of tools/database you're normally to do such job?

Many thanks,
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Old 04-29-2010, 09:57 AM   #2
Uwe Appelt
Location: Heidelberg, Germany

Join Date: Oct 2009
Posts: 27

try these:

cisRED: Databases of genome-wide regulatory module and element predictions

TRANSFAC tools @

3) and additionally, here's an overview, pointing to various tools:

Hope, this helps.

Uwe Appelt is offline   Reply With Quote

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