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Old 09-04-2015, 11:48 AM   #1
KellerMac
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Location: Baton Rouge, Louisiana

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Default Sorting VCFs from INFO field

VCFs have an INFO column that contains many sub-categories, depending on the annotations available at the time of calling. Is there a method of sorting VCFs using the sub field info? This would seem like powerful use of the format. If you know of anything or want to do the coding yourself, let me know please!
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Old 09-04-2015, 12:33 PM   #2
lindenb
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I wrote a tool to sort a VCF on the INFO field https://github.com/lindenb/jvarkit/wiki/SortVCFOnInfo
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