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Old 06-06-2010, 09:07 PM   #1
GERALD
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Default ChIP-Seq comparisons

I am interested in methadologies for comparing the results of multiple ChIP-Seq studies (i.e. multiple transcription factors, TFs and histone modifications). Does anyone know of good resources for doing this?
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Old 06-09-2010, 03:14 AM   #2
flxlex
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Moved to a more appropriate forum ...
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Old 07-09-2010, 04:36 AM   #3
simonvh
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I'm not sure what your specific aims are but you can try Catch (http://catch.cmbi.ru.nl/) or ChromaSig (http://bioinformatics-renlab.ucsd.ed...wiki/ChromaSig).
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