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SeqMap is able to generate Eland output but there are some columns missing in Eland output. Anybody having this problem too?
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Napoleon Bonaparte: "Money, money, money!", bioinformatician: "Format, format, format, ..." -
Which version of the GAPipeline are you using? -
We're not using GAPipeline. We receive Solexa reads in numeric format and do the alignment ourselves with SeqMap.
I don't know what type of Solexa machine is used in our sequencing facility or their software specifications.Napoleon Bonaparte: "Money, money, money!", bioinformatician: "Format, format, format, ..."Comment
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Proteins are often described as the workhorses of the cell, and identifying their sequences is key to understanding their role in biological processes and disease. Currently, the most common technique used to determine protein sequences is mass spectrometry. While still a valuable tool, mass spectrometry faces several limitations and requires a highly experienced scientist familiar with the equipment to operate it. Additionally, other proteomic methods, like affinity assays, are constrained...04-04-2024, 04:25 PM -
Despite advancements in sequencing platforms and related sample preparation technologies, certain sample types continue to present significant challenges that can compromise sequencing results. Pedro Echave, Senior Manager of the Global Business Segment at Revvity, explained that the success of a sequencing experiment ultimately depends on the amount and integrity of the nucleic acid template (RNA or DNA) obtained from a sample. “The better the quality of the nucleic acid isolated...03-22-2024, 06:39 AM
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