Hi Everyone,
We are looking at 'loss of function' variants in the human genome. I am using a program called 'ALoFT' to identify LoF variants. Problem is that my data has GRCh38 chromosome and position.
Has anyone here used ALoFT with GRCh38 data files? (These are the resource files that ALoFT uses to make calls.) The program is downloaded with 'data' for hg19, but not hg38/grch38. I am looking for the latter. (Although there are scores for hg38 on the web site, the files are not quite the same format.)
Joe White
We are looking at 'loss of function' variants in the human genome. I am using a program called 'ALoFT' to identify LoF variants. Problem is that my data has GRCh38 chromosome and position.
Has anyone here used ALoFT with GRCh38 data files? (These are the resource files that ALoFT uses to make calls.) The program is downloaded with 'data' for hg19, but not hg38/grch38. I am looking for the latter. (Although there are scores for hg38 on the web site, the files are not quite the same format.)
Joe White
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