Hi,
I have a specific question about the QUAL score calculated by GATK used by the MiSeq Reporter. The QUAL used to be a phred scaled score, but now it is scaled from zero to several hundred of thousands. Anybody knows how it is calculated?
I have a specific question about the QUAL score calculated by GATK used by the MiSeq Reporter. The QUAL used to be a phred scaled score, but now it is scaled from zero to several hundred of thousands. Anybody knows how it is calculated?