I'm in dire need of free/cheap software that does something I think is simple, but seems to be rare (without paying through the nose).
I just want to be able to input a long sequence (or sequences) and a list of features and coordinates, and output a publication-quality graphic of the sequence as a line or rectangular box, with the features accurately mapped onto it as different shapes/colors. And I'd like the output to be proportional, so that if sequence A is 2 millions bases and sequence B is 1 million, the first line will be twice as long as the second.
Packages I've looked at so far, which seem geared for plasmids, fall down in one or more of these criteria. Any suggestions?
I just want to be able to input a long sequence (or sequences) and a list of features and coordinates, and output a publication-quality graphic of the sequence as a line or rectangular box, with the features accurately mapped onto it as different shapes/colors. And I'd like the output to be proportional, so that if sequence A is 2 millions bases and sequence B is 1 million, the first line will be twice as long as the second.
Packages I've looked at so far, which seem geared for plasmids, fall down in one or more of these criteria. Any suggestions?
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