Hi,
I have Sanger reads on .abi format and NGS reads in .fastq format. They are both from the same bacteria.
I was thinking if I could convert .abi to fasta (I know how to do that) and convert my NGS reads to .fasta (I also know how to do that) and use both to do an alignment using bowTie (this programs can use a .fasta input, rigth? Unlike bwa)
Any thought about this?
Thanks in advance
I have Sanger reads on .abi format and NGS reads in .fastq format. They are both from the same bacteria.
I was thinking if I could convert .abi to fasta (I know how to do that) and convert my NGS reads to .fasta (I also know how to do that) and use both to do an alignment using bowTie (this programs can use a .fasta input, rigth? Unlike bwa)
Any thought about this?
Thanks in advance
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