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Old 10-24-2013, 09:54 PM   #1
Location: Japan

Join Date: Oct 2010
Posts: 52
Question exonerate Segmentation Fault on Red Hat Enterprise Linux Server release 6.4

I compiled exonerate-2.2.0 on two different machines:
1) CentOS release 5.8 (Final)
2) Red Hat Enterprise Linux Server release 6.4 (Santiago)

On 1 it works fine, on 2 it crashes immediately with Segmentation Fault.

However, it is absolutely necessary that I run exonerate on machine 2 not 1, because 2 is the head node of a cluster, while 1 is just a single machine and not capable of using exonerate on the many libraries which I have in any reasonable time.

I have no idea how to proceed. Is there any way how I can figure out what causes the Segmentation Fault?

I am running exonerate as part of RetroSeq, but I could narrow the error down to exonerate, i.e. it is exonerate that causes the Segmentation Fault, not RetroSeq.
Azazel is offline   Reply With Quote

exonerate, segfault, segmentation fault

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