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Old 05-01-2010, 01:31 PM   #1
wangzkai
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Default Samtools merge

A quick question on Samtools merge:

Will the output bam file from Samtools merge remain to be sorted by chromosome coordinate?

Thanks!
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Old 05-01-2010, 01:35 PM   #2
nilshomer
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Quote:
Originally Posted by wangzkai View Post
A quick question on Samtools merge:

Will the output bam file from Samtools merge remain to be sorted by chromosome coordinate?

Thanks!
This is a question that can be quickly answered just by testing a merge on a small dataset (even artificial).
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