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Old 09-29-2011, 03:39 PM   #1
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Location: canada

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Question bowtie programming

I want to use bowtie to do alignment for several hundreds times. Is there anybody who knows any way to call bowtie program so that I won't type hundreds times. Thanks a lot!
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Old 09-29-2011, 04:23 PM   #2
Nils Homer
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Shell scripting is an easy way to go, or group them all into one fastq.
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bowtie call function

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