Hello everyone!
I'm a new guy here, and this is my first post.
I'm doing the de novo assembly work with the Illumina sequencing data (form GAIIx v1.3, pair-end reads 150bp x 2). I find the raw data I got from the bio-company is not so good(shown in the FastQC figure).
I wonder if there is a criterion in Illunima Company or some other commonly used rules for evaluating the quality of GAIIx sequencing data.
According to the criterion, if the data quality is bad, I will ask the company to sequence our genome again.
Thank you very much!
I'm a new guy here, and this is my first post.
I'm doing the de novo assembly work with the Illumina sequencing data (form GAIIx v1.3, pair-end reads 150bp x 2). I find the raw data I got from the bio-company is not so good(shown in the FastQC figure).
I wonder if there is a criterion in Illunima Company or some other commonly used rules for evaluating the quality of GAIIx sequencing data.
According to the criterion, if the data quality is bad, I will ask the company to sequence our genome again.
Thank you very much!
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