Hi
I am wondering if anyone knows of a convertor for ABI's mapping file to SAM BAM format?
it looks like this.
[ $ ] tail Sample1_subset_F3.csfasta.ma
I am wondering if anyone knows of a convertor for ABI's mapping file to SAM BAM format?
it looks like this.
[ $ ] tail Sample1_subset_F3.csfasta.ma
Code:
>2356_2045_1618_F3,2_9780368.0:(45.2.0):q61,13_-46421072.1:(25.1.0):q0 T3003303120330031323000033003.0321110222300.2310.32 >2356_2045_1635_F3 T3003321031213222211030331223.1132002223023.2310.21 >2356_2045_1742_F3 T3332030300202331130102230323.2030332101022.2012.00 >2356_2046_1295_F3,18_-23217631.2:(41.5.0):q36 T1113023310100030330330220332.023.332231100.2330.33 >2356_2046_1911_F3 T3313301232013003321312230013.111.303323133.2303.23
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