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10-05-2018, 08:55 AM
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#1 |
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Member
Location: OH, USA Join Date: Oct 2013
Posts: 18
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Error while extracting fasta seqeunces from stringtie merged gtf.
I have used stringtie -merge option to get a merged gtf file of my assembly. However, when I use gffread to extract sequences from the merged gtf, I get the following error.
Error (GFaSeqGet): subsequence cannot be larger than 465 Error getting subseq for gene1 (465..1503)! Has anybody ran into this earlier? Any suggestions will be greatly appreciated! |
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