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  • 23andme raw Illumina intensity reads

    Has anyone been able to get the raw Illumina reads from 23andme?

    I have asked repeatedly about this and just get a runaround answer. Are we not entitled to the raw data to do our own analysis, instead of just getting their list of genotype calls?

    As FDA looks into regulating the DTC genotyping sector, I am advocating that the vendors be required to release the raw data to the subject.

    What do you think?

    - Ron
    9
    absolutely!
    77.78%
    7
    maybe
    0.00%
    0
    no
    22.22%
    2
    I am afraid of data
    0.00%
    0

    The poll is expired.

    Professor of Pharmaceutical Sciences at Southern Illinois University. Subject of the Personal Genomes Project with CGI genome sequencing, funded by a university seed grant. Annotated human and mouse genomes at the Washington University (St. Louis) GSC during Bob Waterston's tenure. Worked in nematode gene discovery at Divergence, Inc. Recent NSF grant in yeast recombinant genetics. Teach pharmacogenomics, human genomics and pharmaceutical biotechnology.

  • #2
    V3 chip

    My understanding is they are using chip technology and therefore there are no illumina reads. I suppose you could ask for the raw chip data.

    Comment


    • #3
      I would have loved to get the probe intensities (assuming you mean your SNP chip, not the recent exome data), but they denied me too. I would love to hear if others were able to get rawer data.

      Comment


      • #4
        yes, I mean the Illumina OmniExpress Plus latest chip raw data. Are they even offering the exome product yet?
        Professor of Pharmaceutical Sciences at Southern Illinois University. Subject of the Personal Genomes Project with CGI genome sequencing, funded by a university seed grant. Annotated human and mouse genomes at the Washington University (St. Louis) GSC during Bob Waterston's tenure. Worked in nematode gene discovery at Divergence, Inc. Recent NSF grant in yeast recombinant genetics. Teach pharmacogenomics, human genomics and pharmaceutical biotechnology.

        Comment


        • #5
          Originally posted by rworthi View Post
          yes, I mean the Illumina OmniExpress Plus latest chip raw data. Are they even offering the exome product yet?
          Yes, I sent my sample in this week for my exome. There is a 4 month waiting period before getting the data back.

          Comment

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