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Old 04-05-2019, 11:50 PM   #1
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Location: India

Join Date: Mar 2019
Posts: 5
Question Is it possible to print DNA sequences of subject organism in tblastn?

I did tblastn analysis by following command
HTML Code:
tblastn -query t3ss.fasta -subject org1.fasta -outfmt '6  qseqid qstart qend sseqid sstart send pident length evalue sseq' -out org1.xls
It prints the subject coordinates and translated amino acid sequences etc., Is there any way to print the DNA sequences of subject organism in tblastn?
dineshkumarsrk is offline   Reply With Quote

alignment, blast, sequence analysis, tblastn

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