Hi,
I want to use goseq to do GO enrichment of RNAseq data of a bacteria and archaea. But I was stucked by the gene to GO term list.
I have try the biomart method here(http://seqanswers.com/forums/showthread.php?t=21829) in R,
but unfortunately, biomart now seems not support bacteria now. so how could I fetch a list of gene to GO terms?
Thanks in advance!
Pengfei
I want to use goseq to do GO enrichment of RNAseq data of a bacteria and archaea. But I was stucked by the gene to GO term list.
I have try the biomart method here(http://seqanswers.com/forums/showthread.php?t=21829) in R,
but unfortunately, biomart now seems not support bacteria now. so how could I fetch a list of gene to GO terms?
Thanks in advance!
Pengfei