SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics



Similar Threads
Thread Thread Starter Forum Replies Last Post
MEGAN and blast against NR orlajos Metagenomics 2 07-06-2015 03:42 AM
Questions: Reads scores for RDP Classifier files imported into MEGAN khoojj Bioinformatics 0 08-05-2014 06:10 AM
MEGAN - how many BLAST hits to keep for each? camilaz Bioinformatics 3 07-08-2014 08:30 AM
Custom Blast database for MEGAN metagenomics OllyBolly Bioinformatics 2 12-20-2012 12:19 AM
Blast-like program to use with MEGAN? kga1978 Bioinformatics 3 11-30-2012 07:26 AM

Reply
 
Thread Tools
Old 05-16-2018, 01:52 AM   #1
morning latte
Member
 
Location: MI

Join Date: Jun 2013
Posts: 91
Default Has anyone imported IMG blast result to MEGAN?

Hello experts,

I blasted my contigs against the IMG/VR database. When I imported blast output to MEGAN, MEGAN didn't assign any contigs to taxonomy of course. In this case, what can I do? Where can I find a MEGAN menu to import the fasta file (IMG/VR database) I used for blasting? I am currently using MEGAN5.

Thanks for your help in advance.
morning latte is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 06:55 PM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2018, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO