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Old 02-18-2013, 07:57 PM   #1
Galaxy user
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Location: Canada

Join Date: Feb 2013
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Post Galaxy-ChIP-seq analysis: UCSC Genome browser can't read the wig file.

Hello guys,

I am using the Galaxy web tool to analyze ChIP-seq data. By applying MACS algorithm, the Galaxy browser generated bed and wig files. Within the Galaxy browser, the bed file has a link to the UCSC Genome browser, whereas the wig file has no link to the UCSC browser. I wonder which file is best to visualize the peaks in the UCSC Genome browser and how? Any experience or just thoughts?

Thank you in advance!
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