SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics



Similar Threads
Thread Thread Starter Forum Replies Last Post
Repeatmodeler reproducibility holmrenser Bioinformatics 0 10-23-2014 02:05 AM
RepeatModeler Error fahmida Bioinformatics 3 07-23-2013 12:21 AM
RepeatModeler chrisbioinfo Bioinformatics 15 06-19-2013 10:11 AM
RepeatModeler runtime sunhh Bioinformatics 0 10-02-2012 10:14 AM

Reply
 
Thread Tools
Old 02-12-2021, 08:35 AM   #1
xunsheng
Junior Member
 
Location: NM

Join Date: May 2013
Posts: 2
Lightbulb RepeatModeler results contain functional domains?

Dear All,

The repeat families predicted by RepeatModeler contain known TEs and unknown ones. How do we know whether some of which may be actually a functional domain of a gene? It's predicted as repeats may simply due to this domain appeared in multiple gene loci?

Thanks.
xunsheng is offline   Reply With Quote
Reply

Tags
de novo genome, genome annotation, repeat masking

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 08:55 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO