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  • Simulators for inserting SV using translocations prespecified in a BED file

    Hello all,

    I am new to NGS and I am trying to generate some simulated SV data specifically for translocations. I looked into several SV simulators such as SCNVsim and RSVsim etc. These simulators generate translocations on their own. However, what if I have a BED file and I want the simulator to insert the translocations given in the BED file and then generate reads. Is it possible? If yes, can you please tell me which simulators can be used for it.

    Thanks a lot in advance. I apologize if this question is redundant. I am new to all this so just trying to figure out things.

    Thanks.

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