Does anyone have bed file with labels for SureSelect All Exon g3362 ?

[swNGS]

Hi,

I'm after a bed file for Agilent's SureSelect AllExon G3362 kit that contains label info for each targeted region. I have a unlabelled version, which is not a lot of good if I want to get a bit more info on the regions.

I cant find a link on Agilent's website or through googling, and hoped someone on this forum would have a copy tucked away somewhere?

Thanks

[jkerouac]

Looking for same thing (v4+UTRs). Did you find it?

[swNGS]

Nope, I've moved onto other topics since then, but I would suggest getting it directly from Agilent as an existing or potential customer

[jkerouac]

Thanks for the reply. I called Agilent tech support (800-227-9770 (Option 3, Option 4, Option 4) and they sent me the Agilent all exon V4 + UTR bed file within an hour. Now to see how much this helps with my run times on GATK Haplotypecaller, which are just killing me.