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Old 03-20-2012, 07:01 AM   #1
clarissaboschi
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Location: US

Join Date: Apr 2010
Posts: 63
Question How to run SIFT in Linux?

Hi, I installed SIFT software in Linux (http://sift.jcvi.org/), but I donít know how to run (command lines) and how should be the input file for non human genomes (thousands of SNPs).

I did not find any information.

I know that I need a file with the protein sequences, but the substitutions should be in the same file with the coordinates?

thanks
C
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Old 07-22-2012, 07:25 AM   #2
ersgupta
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download the code and the database from the sift website and follow the instructions in the readme... i guess its pretty straight forward.. lemme knw if u have any specific doubt in that...

Last edited by ersgupta; 07-22-2012 at 07:30 AM.
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