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Old 07-11-2012, 06:10 PM   #1
Location: China beijing

Join Date: Jan 2010
Posts: 15
Default How to calculate gene expression level

Hi, everyone!
I have the gtf annotation for mouse genome and rna-seq mapping to genome result(sam/bam). I want to know whether a software could calculate the genes' expression level based on these data.

Thanks for your time!

Last edited by fgh1124; 07-11-2012 at 06:43 PM.
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Old 07-12-2012, 02:35 AM   #2
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Location: USA, Midwest

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Posts: 1,178

Didn't someone answer this same question for you last March?

If you are looking for NGS Bioinformatics software the Software Hub Wiki is a good place to start.
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