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Old 01-17-2012, 02:31 AM   #1
Location: Pavia

Join Date: Nov 2011
Posts: 25
Default Problem to install gene pattern on linux from a war file. Help please!!!!

Hi everybody.
I tried several times to install genepattern from the war. file on my pc.
I followed all the step that i found on:

but unfortunatelly i'm not able to start genepattern on the server using tomcat6.
When I try to complete the installation by connecting to the GenePattern web application at the installFrame.jsp page the server looks running but nothing goes on

I used tomcat 6 and i went to the following link, where erizzo and are the host and domain that I used.

I modified the GenePatternURL on the file using

Did anyone had the same problems?
desmo is offline   Reply With Quote
Old 01-18-2012, 06:16 AM   #2
Junior Member
Location: Cambridge, MA

Join Date: Aug 2011
Posts: 5

From the GenePattern Lead developer:

I recommend that you use our installer, which will deploy Tomcat 5 for you and get you up and running quickly and easily.
It is not that uncommon to have multiple Tomcat servers running, if you must support other web applications.

Best regards,
Barbara Hill
Software Test Engineer
Cancer Informatics Development
Broad Institute of Harvard and MIT
Cambridge, MA
bhill is offline   Reply With Quote


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