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Old 10-22-2012, 07:49 AM   #1
Location: Frankfurt(M), Germany

Join Date: Jan 2011
Posts: 58
Question Defining new gene Clusters

I am interested in defining gene clusters(Gene having same functions/protein products) in a nematode genome. Is there any available software/methods defining these clusters? I have gone through some articles. They defined gene clusters, if 3 genes in a row having same function. Is there any possibility with sliding window approach? Lets say in a window of 5kb, if we get 3-4 genes (with same protein product) we can assign a cluster/island. Please suggest me other possible ways and any article related to this kind of cluster study.
Many thanks in advance,
Rahul Sharma,
Frankfurt am Main, Germany
rahularjun86 is offline   Reply With Quote

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