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Old 02-07-2011, 03:52 AM   #1
andrehorta
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Location: Brazil - Belo Horizonte - UFMG

Join Date: Jan 2011
Posts: 14
Smile BOWTIE - Build Indexes - tutorial

Hi Everyone,

I would like to build a BOWTIE index for the SNP rs4244285A. I created a text file with this characteres:
>rs4244285-aleloA
ATAAATTATTGTTTTCTCTTAGATATGCAATAATTTTCCCACTATCATTGATTATTTCCCAGGAACCCATAACAAATTACTTAAAAACCTTGCTTTTATGGAAAGTGATATTTTGGAGAAA

Later, i rename the file for rs4244285.fa and use the command bowtie-build to generate six files .ebwt.

It's correct?
Thanks
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