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Old 06-07-2010, 07:40 AM   #1
Anna Esteve
Junior Member
Location: Spain

Join Date: Jan 2010
Posts: 7
Default soap2 and fastq

Hi, I would like to know which of these three fastq formats is suitable for soap2:

Sanger standard
    fastq-sanger 33126 33 PHRED 0 to 93
Solexa/early Illumina
    fastq-solexa 59126 64 Solexa −5 to 62
Illumina 1.3+
    fastq-illumina 64126 64 PHRED 0 to 62[/B]

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Old 05-14-2012, 05:16 AM   #2
Location: Beijing

Join Date: Dec 2011
Posts: 13

It seems only support 64? I have the same doubt, anyone knows?
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