Hi,
I have downloaded the refSeq genes table from the UCSC website and wish to use it with the GATK IndelGenotyper tool. To do this apparently GATK requires reference-ordered data (rod). Does anyone know how to do this? Is there a script out there that I can use?
Thanks very much,
Kath
I have downloaded the refSeq genes table from the UCSC website and wish to use it with the GATK IndelGenotyper tool. To do this apparently GATK requires reference-ordered data (rod). Does anyone know how to do this? Is there a script out there that I can use?
Thanks very much,
Kath
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