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  • GenGIS, a geospatial information system for genetic and genomic data

    New piece of software mentioned at DNA-FORUMS for mapping data in 3D

    "Hi everyone,

    We have recently released the first full version of GenGIS, a geospatial
    information system for genetic and genomic data. GenGIS allows the
    integration of digital maps, sequence information, and trees to build 2D
    and 3D geophylogenies, and show similarity-based clustering of
    georeferenced samples.

    The software includes a Python console that allows the user to script
    data analyses and video flythroughs, and hooks into the R statistical
    language allowing exposed data to be passed directly into R.

    GenGIS is extensively documented, with tutorial movies and examples. It
    is available for Win32 and Mac OSX (tested on Leopard). We are also in
    the process of using GenGIS to track data from the emerging H1N1
    outbreak. Classical examples include the salamander 'ring species'
    Ensatina eschscholtzii, and Banza katydids from the Hawai'i archipelago.

    Main GenGIS page:


    Documentation including tutorials:


    H1N1 page:


    Best wishes,
    Rob Beiko
    Faculty of Computer Science, Dalhousie University
    beiko[at]cs.dal.ca"
    FullGenomes Kit 045DV YFull Terminal SNP Y2846 FTDNA Kit 52277 M35>V12>CTS693>CTS3346>Y2877>CTS6667>CTS8411>Y2846 MTdna U4b1a3a

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