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Old 07-13-2011, 09:48 PM   #1
bioiion
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Default how do you normalize MBD sequencing data?

Are there tools to normalize read count or find peaks with MBD sequencing data ?

or Any suggestion for doing that?

Thank you.
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Old 07-14-2011, 10:01 AM   #2
kwatts59
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Take the number of mapped reads in your sample and divide it by the number of mapped reads in your control. Use this result to normalized your read data.
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Old 07-14-2011, 05:32 PM   #3
bioiion
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Thank you.

But what if I do not have input data but comparative data like tumor vs normal?
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Old 07-23-2011, 03:36 AM   #4
volks
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do you expect copy number variations?
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