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Old 12-22-2011, 10:00 AM   #1
wwmm933
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Default How to extract SNP information of a specific population from 1KG data?

Hi,

I'd like to extract the variant information for Europe population from 1000 Genomes project data. I had the list of individual ID and corresponding population and I had a list of SNPs downloaded from 1KG (but it is for all populations). How can I extract SNP information of Europe population? How to get the allele frequency of those SNPs?

Thanks!
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