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Old 07-17-2013, 12:10 AM   #1
Mali Salmon
Location: UK

Join Date: Jul 2008
Posts: 24
Default large indels in targeted sequencing

Hello List
We would like to find large deletions and insertions (>30bp) in targeted sequencing data. We are wondering which technology to use for that purpose. Ion torrent? illumina? single or paired reads?
Any advice would be welcome
Mali Salmon is offline   Reply With Quote
Old 07-31-2013, 10:54 PM   #2
Location: india

Join Date: Jun 2013
Posts: 42

HI Mali Salmon,

What genome are you working at.

If its human genome, as of i know- go for illumina paired end. That will be of help for your experiments.

vishnuamaram is offline   Reply With Quote

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