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  • miRNA library prep

    I am having trouble size selecting on the TBE gels for the sm RNA preps? Any advice on what dyes and stains work best?

  • #2
    staining TBE gel

    We use SYBR for staining miRNA libraries post PCR. Our buffers gel loading buffers come from a kit. Resolution and separation of miRNAs products works well with SYBR.

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    • #3
      what percentage gel works best? did you use a TBE-Urea gel?

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      • #4
        8% no urea

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        • #5
          i was under the impression it is standard to use denaturing conditions when running RNA?

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          • #6
            Hi
            Not sure what are you asking for...isolating small RNAs or libraries made from miRNAs?
            At least, I did it (small RNA isolation) with 15% denaturing (UreaGel from National Diagnostics) PAGE.
            The library purification (eliminate any kind of primer dimer, adapters, etc) I used 10% non-denatuting PAGE.

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