Hello all,
I have been using AlingGraph to aling contigs I have to a reference genome. This program uses blat, however only supports up to version 34. I downloaded the blatSrc34.zip source code file and followed the README for installation on a Mac OSX 10.10.5. I get this error when executing the last step by running the make file using 'make' in the blastSRC directory:
$ make
cd lib && /Applications/Xcode.app/Contents/Developer/usr/bin/make
gcc -O -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_ -DJK_WARN -Wall -Werror -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -o aliType.o -c aliType.c
aliType.c:5:19: error: unused variable 'rcsid' [-Werror,-Wunused-const-variable]
static char const rcsid[] = "$Id: aliType.c,v 1.4 2003/05/06 07:33:41 kate Exp $";
^
1 error generated.
make[1]: *** [aliType.o] Error 1
make: *** [all] Error 2
Any help with this?
I have been using AlingGraph to aling contigs I have to a reference genome. This program uses blat, however only supports up to version 34. I downloaded the blatSrc34.zip source code file and followed the README for installation on a Mac OSX 10.10.5. I get this error when executing the last step by running the make file using 'make' in the blastSRC directory:
$ make
cd lib && /Applications/Xcode.app/Contents/Developer/usr/bin/make
gcc -O -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_ -DJK_WARN -Wall -Werror -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -o aliType.o -c aliType.c
aliType.c:5:19: error: unused variable 'rcsid' [-Werror,-Wunused-const-variable]
static char const rcsid[] = "$Id: aliType.c,v 1.4 2003/05/06 07:33:41 kate Exp $";
^
1 error generated.
make[1]: *** [aliType.o] Error 1
make: *** [all] Error 2
Any help with this?
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