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Old 12-26-2012, 06:17 AM   #1
mrfox
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Location: USA

Join Date: Aug 2010
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Default alternative splicing for SOLiD data

Hi all,
I have some SOLiD (paired-end, Control/Treatment matched samples). We aim to analyze the alternative splicing events between Control and Treatment. As for the analysis tools, does anyone have recommendation apart from cufflinks/cuffdiff?

Thank you very much!
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