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Old 07-30-2016, 05:13 PM   #1
sk_minu
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Location: New zealand

Join Date: May 2016
Posts: 1
Default Post binning

Are there any binning programme available to do binning just on the basis of coverage and GC % ?

I used SPAdes to generate assembly and then MetaBAT for binning. I get few bins that are really large in size (~15mbp). So, Now I am looking for a potential binning programme that can be use as post binning method and bin contigs on the basis of their coverage and GC% only and not consider di-tetra nucleotides frequency in account.

Thanks.
Sandeep

Last edited by sk_minu; 07-31-2016 at 12:52 PM.
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