Hello Guys,
I have a project task, and i need to implement CEGMA for validating the predicted genes in the de-novo assembly. i have successfully installed and done a test run for CEGMA. and it produces a correct output for the sample data.
Apart from that i have no idea on what are the inputs for cegma, do we have to download the datasets which are mentioned on the website (http://korflab.ucdavis.edu/datasets/cegma/#SCT6) under the section of Core eukaryotic genes dataset.
Would really appreciate if someone can explain in simple words, about how to use cegma!
I have a project task, and i need to implement CEGMA for validating the predicted genes in the de-novo assembly. i have successfully installed and done a test run for CEGMA. and it produces a correct output for the sample data.
Apart from that i have no idea on what are the inputs for cegma, do we have to download the datasets which are mentioned on the website (http://korflab.ucdavis.edu/datasets/cegma/#SCT6) under the section of Core eukaryotic genes dataset.
Would really appreciate if someone can explain in simple words, about how to use cegma!
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