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07-03-2013, 12:48 AM
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#1 |
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Member
Location: China Join Date: Jan 2012
Posts: 12
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can cuffdiff handle the samples with different treatments and a time series?
Hi friends,
Recently, I got a problem, I have two treated samples, one is KO, and the other is WT (as control), and the two samples also have a time series. In other words, I have four sequencing samples: KO0h, KO5h, WT0h, and WT5h. What I should do with cuffdiff?  Grateful to any suggestions Thanks very much! |
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10-10-2013, 11:59 AM
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#2 |
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Senior Member
Location: Norway Join Date: Aug 2013
Posts: 266
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Im wondring the same....
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| Tags |
| cuffdiff, knockout, time-course, wildtype |
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