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04-14-2016, 07:10 AM
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#1 |
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Member
Location: Charlottesville, VA Join Date: Apr 2010
Posts: 34
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use of BaseSpace app for outside data
Hi All,
Has anyone tried to import outside work into a project in BaseSpace and then use the Apps in BaseSpace to process the data, such as tophat? Thanks Wing |
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04-14-2016, 08:42 AM
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#2 |
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Rick Westerman
Location: Purdue University, Indiana, USA Join Date: Jun 2008
Posts: 1,104
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Yes, I have tried. Did not work as of about 6 months ago.
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04-14-2016, 04:22 PM
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#3 |
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Senior Member
Location: Monash University, Melbourne, Australia. Join Date: Jan 2008
Posts: 246
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Yes. What in particular did you want to know?
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04-19-2016, 11:23 AM
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#4 |
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Member
Location: Charlottesville, VA Join Date: Apr 2010
Posts: 34
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I am just wondering if I can take a piggy-back of the APPs in BaseSpace for analysis of, say, RNA-Seq data, which were generated outside of BaseSpace.
Thanks W |
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04-22-2016, 08:43 AM
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#5 | |
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Member
Location: North Carolina Join Date: Sep 2011
Posts: 38
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Quote:
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04-22-2016, 10:31 AM
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#6 |
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Senior Member
Location: California Join Date: Jul 2014
Posts: 198
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Seems like more work than it's worth IMO. Why not use Galaxy if that's what you're looking for?
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| Tags |
| bioinformatic, illumina |
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