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Thread | Thread Starter | Forum | Replies | Last Post |
Bisulphite Sequencing Proof-reading or NOT proof-reading? | yog77 | Epigenetics | 1 | 01-25-2012 07:45 AM |
an error of reading fastq by tophat | aquleaf | Bioinformatics | 0 | 10-23-2011 08:25 AM |
When is Open reading frame=gene? | ritzriya | RNA Sequencing | 4 | 10-06-2010 09:10 PM |
sequence reading software | junkfish | Bioinformatics | 2 | 02-18-2010 08:36 AM |
Reading run reports and other documents | new300 | Bioinformatics | 0 | 04-17-2009 06:51 AM |
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#1 |
Junior Member
Location: Raleigh, NC Join Date: Aug 2009
Posts: 3
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What are considered "good" ranges for intensity and % alignment?
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#2 |
Junior Member
Location: Raleigh, NC Join Date: Aug 2009
Posts: 3
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I am referring to the GERALD summary information and what are considered to be "good" ranges. Is there any documentation on this? I am not running the sample, just receiving the fastq files.
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#3 |
Junior Member
Location: Raleigh, NC Join Date: Aug 2009
Posts: 3
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Thanks for all your help.
![]() Some friends at WashU answered my questions. |
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#4 |
Junior Member
Location: Mercer Island WA Join Date: Apr 2014
Posts: 2
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I am working with at lab that will be doing pharmacogenetic assays using MiSeq. Getting the genotypes will be straightforward but copy number detection for CYP2D6 is a challenge on any platform because of confusion with CYP2D7. Does anyone know if there is a recommended way of estimating copy numbers with MiSeq?
Thanks, Don Rule Translational Software |
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